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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2163005_2163230_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2163005 - 2163230

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CCGTCTCTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATCAG

U12 Branch Point Sequence:

TGGGGCTAGAGG

Flanking Amino Acid:

GWKLKQEQITARDLGEAGFR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.9

40.9

Major BPS

48.6

-0

1.7

59.7

46.7

Major PPT

73.6

0.53

0.8

65.4

36.2

Minor 5ss

31.9

-2.1

3.3

41.4

45.1

Minor BPS

36.8

-1.1

2.2

38.2

45.3

Associated Gene:

Gene:

RBPJL

Ensembl Gene ID:

ENSAPLG00000008031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008359

2150568 - 2167259

16692