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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2163347_2164113_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2163347 - 2164113

Intron Length:

767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGA

5'SS Class:

strong_major

3'SS Sequence:

GTGCCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCCCAT

U12 Branch Point Sequence:

CCCAGCCCATGC

Flanking Amino Acid:

LSFEEQPDSKGFSCAKALYI

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

33.8

Major BPS

49.3

-0

1.3

58.2

40.4

Major PPT

70.4

0.46

0.9

62.5

34.6

Minor 5ss

38.9

-1.2

2.9

49.9

46.3

Minor BPS

27.4

-1.7

27.01

36.2

Associated Gene:

Gene:

RBPJL

Ensembl Gene ID:

ENSAPLG00000008031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008359

2150568 - 2167259

16692