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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2165209_2165420_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2165209 - 2165420

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCCTC

5'SS Class:

strong_major

3'SS Sequence:

CCCCGCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CCATGCTGAGCA

Flanking Amino Acid:

TATGITLPPLIIRKVSKQYA

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

68.8

42.2

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

64.6

0.33

0.8

27.2

Minor 5ss

42.6

-0.8

3.1

56.9

41.9

Minor BPS

44.5

-0.4

2.1

52.79

45.2

Associated Gene:

Gene:

RBPJL

Ensembl Gene ID:

ENSAPLG00000008031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008359

2150568 - 2167259

16692