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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2165562_2165881_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2165562 - 2165881

Intron Length:

320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAGGG

5'SS Class:

major

3'SS Sequence:

ACCCTCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

CCCACCGTGACA

Flanking Amino Acid:

LSTEKVIQFQASPCPKEANR

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

44.1

Major BPS

0.22

1.2

52.4

43.3

Major PPT

71.3

0.48

0.8

65.1

29.8

Minor 5ss

28.8

-2.4

3.4

38.5

46.5

Minor BPS

46.9

-0.2

2.1

54.43

44.6

Associated Gene:

Gene:

RBPJL

Ensembl Gene ID:

ENSAPLG00000008031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008359

2150568 - 2167259

16692