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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2166038_2166215_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2166038 - 2166215

Intron Length:

178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAGG

5'SS Class:

major

3'SS Sequence:

GCTGCCGCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATAAT

U12 Branch Point Sequence:

GGTGCCATAATG

Flanking Amino Acid:

SPVPLIAALQLTGGGDVAML

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

63.6

48.1

Major BPS

62.9

0.32

1.2

63.9

38.4

Major PPT

61.9

0.27

53.9

36.6

Minor 5ss

37.4

-1.4

3.1

48.3

47.5

Minor BPS

51.9

-0

1.8

57.99

43.5

Associated Gene:

Gene:

RBPJL

Ensembl Gene ID:

ENSAPLG00000008031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008359

2150568 - 2167259

16692