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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2181577_2183223_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2181577 - 2183223

Intron Length:

1647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TCAGCTCTGACA

Flanking Amino Acid:

MSDKLPYKVADISLADWGR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

66.6

39.6

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

85.6

0.8

0.7

80.2

25.1

Minor 5ss

27.1

-2.6

26.2

36.9

Minor BPS

48.7

-0.1

1.8

59.31

40.8

Associated Gene:

Gene:

AHCY

Ensembl Gene ID:

ENSAPLG00000007974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021264

2181549 - 2423615

242067

ENSAPLT00000008290

2181549 - 2206800

25252