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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2195687_2196526_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2195687 - 2196526

Intron Length:

840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAACT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGATAAT

U12 Branch Point Sequence:

GGGGGGATAATC

Flanking Amino Acid:

PINALQAAMEGYEVTTMEEA

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.8

83.3

27.9

Major BPS

54.9

0.12

1.4

45.4

Major PPT

92.7

0.96

0.6

91.6

19.6

Minor 5ss

30.7

-2.2

2.9

41.1

44.9

Minor BPS

35.1

-1.1

2.3

40.13

39.7

Associated Gene:

Gene:

AHCY

Ensembl Gene ID:

ENSAPLG00000007974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048265

2182420 - 2206800

24381

ENSAPLT00000024892

2182420 - 2383202

200783

ENSAPLT00000021264

2181549 - 2423615

242067

ENSAPLT00000008290

2181549 - 2206800

25252