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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2202633_2205668_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2202633 - 2205668

Intron Length:

3036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

CTTTTCTCAATG

Flanking Amino Acid:

SVGVHFLPKKLDEAVAAAHL

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.6

36.7

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

88.1

0.86

0.8

80.3

37.3

Minor 5ss

36.1

-1.6

3.3

45.9

49.3

Minor BPS

62.8

0.27

1.6

66.82

41.6

Associated Gene:

Gene:

AHCY

Ensembl Gene ID:

ENSAPLG00000007974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048265

2182420 - 2206800

24381

ENSAPLT00000008290

2181549 - 2206800

25252