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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2220558_2222844_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2220558 - 2222844

Intron Length:

2287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTGTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTGTATGAATT

Flanking Amino Acid:

KEAENKKSSKKKAELKKPPK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.3

1.04

0.8

79.7

35.4

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

0.56

69.5

41.6

Minor 5ss

-1.9

3.2

43.9

Minor BPS

54.5

0.22

1.8

77.48

39.2

Associated Gene:

Gene:

ASIP

Ensembl Gene ID:

ENSAPLG00000007960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026212

2220381 - 2227349

6969

ENSAPLT00000008264

2220381 - 2253375

32995