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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2358188_2362979_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2358188 - 2362979

Intron Length:

4792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTTAATC

Flanking Amino Acid:

LARDECEDELPIQSSSEQWC

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.2

0.81

0.7

80.7

24.5

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

74.8

0.76

1.1

33.7

Associated Gene:

Gene:

RALY

Ensembl Gene ID:

ENSAPLG00000012983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013526

2356385 - 2432847

76463