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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2358495_2362979_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2358495 - 2362979

Intron Length:

4485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

ACGTGGTGATTT

Flanking Amino Acid:

LARDECEDELENSHYTDVED

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

82.5

0.73

0.7

73.7

31.3

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

36.4

-0.9

2.4

50.27

44.3

Associated Gene:

Gene:

RALY

Ensembl Gene ID:

ENSAPLG00000012983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032664

2356385 - 2411418

55034