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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2364667_2375630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2364667 - 2375630

Intron Length:

10964

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTC

5'SS Class:

strong_major

3'SS Sequence:

ACTGTTTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAA

U12 Branch Point Sequence:

CGTTAATTAACG

Flanking Amino Acid:

GLKRAASALYSGYDFDYDYY

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

76.2

39.9

Major BPS

67.7

0.44

58.3

38.4

Major PPT

79.6

0.67

0.9

73.5

36.4

Minor 5ss

37.4

-1.4

3.3

52.4

44.8

Minor BPS

55.1

0.02

1.9

62.66

44.5

Associated Gene:

Gene:

RALY

Ensembl Gene ID:

ENSAPLG00000012983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032664

2356385 - 2411418

55034

ENSAPLT00000013526

2356385 - 2432847

76463