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Intron Name: Anas_platyrhynchos_platyrhynchos_21_272430_273530_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

272430 - 273530

Intron Length:

1101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAATGTTG

5'SS Class:

major

3'SS Sequence:

CTTTGTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTAAT

U12 Branch Point Sequence:

CACTGGTTAATT

Flanking Amino Acid:

LLQGHIRTHTGEKPFSCTHC

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

63.6

43.1

Major BPS

66.6

0.41

1.4

69.7

44.2

Major PPT

81.7

0.71

0.8

75.8

32.8

Minor 5ss

40.9

-1

3.3

56.4

47.8

Minor BPS

46.7

-0.1

2.4

64.11

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014633

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015247

272248 - 274710

2463