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Intron Name: Anas_platyrhynchos_platyrhynchos_21_279059_279272_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

279059 - 279272

Intron Length:

214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTACGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAA

U12 Branch Point Sequence:

ATTTCTGTACCC

Flanking Amino Acid:

RHRFSYDTFVDYDADEDDMM

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

78.1

36.4

Major BPS

55.1

0.13

1.2

57.3

36.3

Major PPT

76.3

0.59

0.8

71.5

Minor 5ss

37.7

-1.4

3.6

54.6

44.9

Minor BPS

52.5

0.06

2.2

72.1

39.6

Associated Gene:

Gene:

RNF114

Ensembl Gene ID:

ENSAPLG00000020959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019308

278993 - 282923

3931

ENSAPLT00000047932

278993 - 283251

4259