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Intron Name: Anas_platyrhynchos_platyrhynchos_21_279381_280236_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

279381 - 280236

Intron Length:

856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAATAAAA

5'SS Class:

major

3'SS Sequence:

TTATTTCTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTATTT

Flanking Amino Acid:

TLHSMDAKQVVCPICASMPW

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

71.5

33.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.3

0.53

33.6

Minor 5ss

-1.9

2.9

37.4

41.2

Minor BPS

64.4

0.53

1.7

84.57

36.4

Associated Gene:

Gene:

RNF114

Ensembl Gene ID:

ENSAPLG00000020959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047932

278993 - 283251

4259

ENSAPLT00000019308

278993 - 282923

3931