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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2794202_2796076_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2794202 - 2796076

Intron Length:

1875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TAATATTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTTTCTTAACT

Flanking Amino Acid:

AIPSKPGRIVAKKREEEEDE

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

27.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.7

0.67

0.9

73.6

40.9

Minor 5ss

38.8

-1.3

3.4

43.6

Minor BPS

1.05

1.1

86.99

39.2

Associated Gene:

Gene:

CHMP4B

Ensembl Gene ID:

ENSAPLG00000012481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029745

2794128 - 2807994

13867