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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2797334_2797742_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2797334 - 2797742

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTATAAAACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

CTTTATAAAACT

Flanking Amino Acid:

PVGFGEDFDEDELMAELEEL

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.5

Major BPS

78.6

0.71

78.6

Major PPT

60.9

0.25

1.1

54.5

43.9

Minor 5ss

70.5

0.69

2.2

81.8

38.5

Minor BPS

48.2

-0

2.1

73.43

43.5

Associated Gene:

Gene:

CHMP4B

Ensembl Gene ID:

ENSAPLG00000012481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029745

2794128 - 2807994

13867

ENSAPLT00000029504

2795955 - 2816329

20375

ENSAPLT00000013000

2793391 - 2816329

22939