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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2798823_2816133_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2798823 - 2816133

Intron Length:

17311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGGGGC

5'SS Class:

major

3'SS Sequence:

TTCTGTTGATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

CTTCTGTTGATC

Flanking Amino Acid:

ARKHGTKNKRAALQALKRKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

58.8

40.6

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

73.3

0.52

73.6

40.6

Minor 5ss

24.6

-2.9

3.4

32.5

42.6

Minor BPS

48.2

-0.1

2.1

61.96

38.3

Associated Gene:

Gene:

CHMP4B

Ensembl Gene ID:

ENSAPLG00000012481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029504

2795955 - 2816329

20375

ENSAPLT00000013000

2793391 - 2816329

22939