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Intron Name: Anas_platyrhynchos_platyrhynchos_21_282376_282774_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

282376 - 282774

Intron Length:

399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

TTTCCCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CGCCTCTCATCC

Flanking Amino Acid:

DSPVRVPCGHVFCTPCLQEC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.4

0.29

1.1

53.3

39.6

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

0.74

0.7

74.2

30.9

Minor 5ss

34.1

-1.8

3.4

43.1

44.2

Minor BPS

44.2

-0.4

1.8

48.16

41.6

Associated Gene:

Gene:

RNF114

Ensembl Gene ID:

ENSAPLG00000020959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047932

278993 - 283251

4259

ENSAPLT00000019308

278993 - 282923

3931