Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_2831568_2832752_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2831568 - 2832752

Intron Length:

1185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TTCCTCTGCACG

Flanking Amino Acid:

RSKNESGLQEGKPKSPKLKC

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

87.6

0.84

0.7

85.1

29.7

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

47.3

-0.3

57.07

44.4

Associated Gene:

Gene:

ZNF341

Ensembl Gene ID:

ENSAPLG00000012237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012749

2820692 - 2837229

16538