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Intron Name: Anas_platyrhynchos_platyrhynchos_21_283550_285540_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

283550 - 285540

Intron Length:

1991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCTCG

5'SS Class:

major

3'SS Sequence:

ATTTCTGTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

TTGTTTGCAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

59.7

41.9

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

82.1

0.72

0.9

73.6

41.2

Minor 5ss

39.2

-1.2

2.9

48.8

46.9

Minor BPS

47.8

-0

2.1

70.83

41.3

Associated Gene:

Gene:

SPATA2

Ensembl Gene ID:

ENSAPLG00000014645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015255

282787 - 289010

6224