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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2841004_2841186_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2841004 - 2841186

Intron Length:

183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TTCGTTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

TTCGTTTTCACA

Flanking Amino Acid:

AAIKGFRNGAVYGAKIRAPH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.1

56.1

43.1

Major BPS

63.6

0.34

65.3

32.1

Major PPT

83.7

0.76

0.8

79.1

32.9

Minor 5ss

28.6

-2.5

3.1

31.9

42.5

Minor BPS

51.6

0.04

1.8

65.59

41.9

Associated Gene:

Gene:

PXMP4

Ensembl Gene ID:

ENSAPLG00000012234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012728

2840864 - 2843087

2224