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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2841809_2842790_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2841809 - 2842790

Intron Length:

982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGTC

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTATCTTTATGC

Flanking Amino Acid:

FGENNPVNSQIVMYLLSRIL

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

29.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

81.9

0.72

0.9

77.6

35.4

Minor 5ss

36.6

-1.5

3.4

45.2

Minor BPS

0.23

1.9

70.76

40.9

Associated Gene:

Gene:

PXMP4

Ensembl Gene ID:

ENSAPLG00000012234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012728

2840864 - 2843087

2224