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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2870350_2870688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2870350 - 2870688

Intron Length:

339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCACTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TTCTCTCCCACT

Flanking Amino Acid:

SDNVDTEKLCDYFSAYLGEY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

65.4

Major BPS

0.28

1.1

63.1

35.8

Major PPT

77.9

0.63

0.8

74.4

29.1

Minor 5ss

33.8

-1.8

2.9

38.2

40.8

Minor BPS

46.7

-0.1

2.2

72.5

44.6

Associated Gene:

Gene:

NECAB3

Ensembl Gene ID:

ENSAPLG00000011538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012087

2860236 - 2878782

18547