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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2870787_2876895_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2870787 - 2876895

Intron Length:

6109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGACG

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

GGCACCTGACCT

Flanking Amino Acid:

VLAAMDKTKLRYETSSKTEQ

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

68.8

41.8

Major BPS

60.1

0.25

35.6

Major PPT

74.5

0.55

0.7

68.7

Minor 5ss

32.7

-2

3.1

40.8

Minor BPS

48.4

-0

1.8

63.45

45.9

Associated Gene:

Gene:

NECAB3

Ensembl Gene ID:

ENSAPLG00000011538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012087

2860236 - 2878782

18547