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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2877033_2877140_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2877033 - 2877140

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGGGG

5'SS Class:

major

3'SS Sequence:

TTTGTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAGGAC

U12 Branch Point Sequence:

GTTTTGTTCCTT

Flanking Amino Acid:

DTMEEQAGRERKDVKKSESS

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.2

58.7

46.2

Major BPS

43.9

-0.3

1.4

37.2

42.1

Major PPT

87.8

0.85

0.7

85.6

29.1

Minor 5ss

34.2

-1.8

3.6

46.8

48.5

Minor BPS

35.5

-1

3.8

67.31

44.3

Associated Gene:

Gene:

NECAB3

Ensembl Gene ID:

ENSAPLG00000011538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012087

2860236 - 2878782

18547