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Intron Name: Anas_platyrhynchos_platyrhynchos_21_2877566_2877692_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2877566 - 2877692

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGAAACGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

GTTTTGTGAAAC

Flanking Amino Acid:

QQLIEKLECKSPRLEPLKED

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.8

39.3

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

62.7

0.29

1.1

56.3

42.7

Minor 5ss

26.5

-2.7

3.2

34.9

41.5

Minor BPS

47.8

-0.1

2.2

65.07

40.1

Associated Gene:

Gene:

NECAB3

Ensembl Gene ID:

ENSAPLG00000011538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012087

2860236 - 2878782

18547