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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3015002_3016405_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3015002 - 3016405

Intron Length:

1404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCTCCCTCACCC

Flanking Amino Acid:

AAYRASLVSKSSADQGETKS

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

71.4

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

82.1

0.72

0.8

76.9

Minor 5ss

-2.1

3.3

43.8

Minor BPS

49.1

-0

1.9

59.91

45.3

Associated Gene:

Gene:

TOX2

Ensembl Gene ID:

ENSAPLG00000009436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026929

3014525 - 3134143

119619

ENSAPLT00000009842

3012801 - 3134143

121343