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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3016487_3025123_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3016487 - 3025123

Intron Length:

8637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CTGGTCCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

GCTTTATTAACC

Flanking Amino Acid:

WDSLGEEQKQAYKRKTEAAK

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

82.9

23.9

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

77.3

0.61

0.9

73.4

37.1

Minor 5ss

38.1

-1.3

49.4

41.3

Minor BPS

65.6

0.47

1.6

71.91

Associated Gene:

Gene:

TOX2

Ensembl Gene ID:

ENSAPLG00000009436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026929

3014525 - 3134143

119619

ENSAPLT00000009842

3012801 - 3134143

121343