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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3025352_3029220_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3025352 - 3029220

Intron Length:

3869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTGGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTAAG

U12 Branch Point Sequence:

TGCCCGCTAAGG

Flanking Amino Acid:

QEEETESHYKVTGEKRPSTD

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

75.5

35.8

Major BPS

47.2

-0.1

1.6

41.4

Major PPT

82.4

0.73

0.9

76.3

37.7

Minor 5ss

32.9

-2

3.3

44.7

43.3

Minor BPS

39.5

-0.9

2.4

46.12

Associated Gene:

Gene:

TOX2

Ensembl Gene ID:

ENSAPLG00000009436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026929

3014525 - 3134143

119619

ENSAPLT00000009842

3012801 - 3134143

121343