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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3029461_3062390_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3029461 - 3062390

Intron Length:

32930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTCAGTGAC

5'SS Class:

major

3'SS Sequence:

TCTCCTACCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

TTTTAGTTAAAC

Flanking Amino Acid:

GHLLSSQLPTIQEMVHSDAT

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.3

67.1

38.9

Major BPS

66.1

0.4

31.5

Major PPT

76.2

0.59

0.8

73.8

29.6

Minor 5ss

28.9

-2.4

36.2

40.7

Minor BPS

56.4

0.18

2.3

76.85

38.8

Associated Gene:

Gene:

TOX2

Ensembl Gene ID:

ENSAPLG00000009436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026929

3014525 - 3134143

119619

ENSAPLT00000009842

3012801 - 3134143

121343