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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3083827_3134001_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3083827 - 3134001

Intron Length:

50175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGGG

5'SS Class:

major

3'SS Sequence:

TTTGCCATTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

ATTTCTCTAACT

Flanking Amino Acid:

GPLDYYHCNKFDGENMYMGM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

63.2

41.7

Major BPS

72.3

0.55

73.3

28.9

Major PPT

75.8

0.58

0.9

67.3

Minor 5ss

29.2

-2.4

3.4

38.5

46.6

Minor BPS

74.6

0.85

1.6

91.26

31.4

Associated Gene:

Gene:

TOX2

Ensembl Gene ID:

ENSAPLG00000009436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026929

3014525 - 3134143

119619

ENSAPLT00000009842

3012801 - 3134143

121343