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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3199687_3199828_R

Intron Information:

Intron Rank:

134768

Intron Class:

major

Intron Phase:

Intron Coordinates:

3199687 - 3199828

Intron Length:

142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTGAATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

GTCTTGTGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

73.5

0.53

63.5

46.2

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

48.5

-0

2.1

68.72

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022661

3199567 - 3210325

10759