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Intron Name: Anas_platyrhynchos_platyrhynchos_21_321306_322511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

321306 - 322511

Intron Length:

1206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTGC

5'SS Class:

major

3'SS Sequence:

CCTCCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

GGCACCTCCATC

Flanking Amino Acid:

AGGMHGPMVKLSIAVCLGFL

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

64.8

42.3

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

82.1

0.72

0.7

76.1

25.9

Minor 5ss

35.7

-1.6

3.5

49.7

46.9

Minor BPS

43.9

-0.5

1.9

48.89

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032860

317053 - 327553

10501

ENSAPLT00000015265

317053 - 323084

6032