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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3298963_3299228_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3298963 - 3299228

Intron Length:

266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTCT

5'SS Class:

major

3'SS Sequence:

AAACTGCATACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTTTTAAACT

Flanking Amino Acid:

DFSQCQSILKEISPLLSMEA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

67.6

37.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

59.8

0.22

1.1

51.1

42.1

Minor 5ss

45.5

-0.5

3.1

65.8

45.4

Minor BPS

67.7

0.63

1.6

83.79

37.4

Associated Gene:

Gene:

TRPC4AP

Ensembl Gene ID:

ENSAPLG00000009980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036596

3289215 - 3323561

34347

ENSAPLT00000010454

3286021 - 3323071

37051