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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3299346_3301903_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3299346 - 3301903

Intron Length:

2558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TATTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ATTCCCTTAATT

Flanking Amino Acid:

YTFDLFGGVDLLVEILMRPT

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

78.2

36.4

Major BPS

83.9

0.84

73.9

41.3

Major PPT

87.2

0.84

0.8

84.8

35.4

Minor 5ss

38.7

-1.3

3.4

53.8

43.6

Minor BPS

83.9

1.14

92.25

29.5

Associated Gene:

Gene:

TRPC4AP

Ensembl Gene ID:

ENSAPLG00000009980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036596

3289215 - 3323561

34347

ENSAPLT00000010454

3286021 - 3323071

37051