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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3301962_3303089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3301962 - 3303089

Intron Length:

1128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

GGCTAGTGAATG

Flanking Amino Acid:

TLMTQKKKQKISDDLIKDCL

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

23.6

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

0.88

0.6

84.2

23.6

Minor 5ss

36.8

-1.5

2.7

42.6

38.4

Minor BPS

40.7

-0.8

2.2

42.73

42.3

Associated Gene:

Gene:

TRPC4AP

Ensembl Gene ID:

ENSAPLG00000009980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010454

3286021 - 3323071

37051

ENSAPLT00000036596

3289215 - 3323561

34347