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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3303146_3304748_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3303146 - 3304748

Intron Length:

1603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

TGTTGCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TGTTGCTTTCCA

Flanking Amino Acid:

LSILYNTCICTEGVTRRLAE

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.56

1.1

37.2

Major BPS

69.8

0.49

37.5

Major PPT

82.5

0.73

0.9

73.4

41.9

Minor 5ss

-1.7

3.2

42.4

44.3

Minor BPS

40.4

-0.7

3.8

68.01

44.1

Associated Gene:

Gene:

TRPC4AP

Ensembl Gene ID:

ENSAPLG00000009980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036596

3289215 - 3323561

34347

ENSAPLT00000010454

3286021 - 3323071

37051