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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3304878_3306062_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3304878 - 3306062

Intron Length:

1185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTAA

5'SS Class:

major

3'SS Sequence:

TTGCCTCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TCATGCACAACT

Flanking Amino Acid:

LIEDILGVKKEMIQLDDIPN

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

32.1

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

77.6

0.62

0.8

36.5

Minor 5ss

-0.9

2.5

49.8

46.5

Minor BPS

47.4

-0.1

2.2

70.19

46.1

Associated Gene:

Gene:

TRPC4AP

Ensembl Gene ID:

ENSAPLG00000009980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036596

3289215 - 3323561

34347

ENSAPLT00000010454

3286021 - 3323071

37051