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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3306265_3308386_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3306265 - 3308386

Intron Length:

2122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

CATAATATAACT

Flanking Amino Acid:

LGPSRAEVNQATLLNIPGFI

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

32.7

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

39.9

-1.1

3.3

57.8

46.8

Minor BPS

48.8

-0

1.8

68.02

42.3

Associated Gene:

Gene:

TRPC4AP

Ensembl Gene ID:

ENSAPLG00000009980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036596

3289215 - 3323561

34347

ENSAPLT00000010454

3286021 - 3323071

37051