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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3308576_3310208_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3308576 - 3310208

Intron Length:

1633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTGGC

5'SS Class:

major

3'SS Sequence:

CCATCTTGTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

TCTTTGCCATCT

Flanking Amino Acid:

ANEEAEQSSTESSDESGLAN

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.2

63.2

41.8

Major BPS

0.55

1.1

63.4

44.3

Major PPT

74.3

0.55

0.9

72.3

37.5

Minor 5ss

44.7

-0.6

61.6

43.3

Minor BPS

39.8

-0.7

2.5

64.08

46.3

Associated Gene:

Gene:

TRPC4AP

Ensembl Gene ID:

ENSAPLG00000009980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036596

3289215 - 3323561

34347

ENSAPLT00000010454

3286021 - 3323071

37051