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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3310352_3314170_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3310352 - 3314170

Intron Length:

3819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAG

U12 Branch Point Sequence:

ACTTCCTTCTCT

Flanking Amino Acid:

VLLMGRQRNQVHKMIAEFRL

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.8

90.9

28.7

Major BPS

63.6

0.34

1.5

63.1

44.4

Major PPT

91.2

0.93

0.6

84.1

30.8

Minor 5ss

45.3

-0.5

2.9

45.2

Minor BPS

45.7

-0.2

3.6

44.5

Associated Gene:

Gene:

TRPC4AP

Ensembl Gene ID:

ENSAPLG00000009980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036596

3289215 - 3323561

34347

ENSAPLT00000010454

3286021 - 3323071

37051