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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3314303_3314961_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3314303 - 3314961

Intron Length:

659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTAAC

5'SS Class:

major

3'SS Sequence:

CTCTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TTGACCTTTATT

Flanking Amino Acid:

GHNQNCDCSPDITLKIQFLR

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

71.6

33.8

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

0.88

0.6

87.5

22.8

Minor 5ss

32.8

-2

2.7

42.3

38.4

Minor BPS

65.6

0.57

1.7

80.72

41.2

Associated Gene:

Gene:

TRPC4AP

Ensembl Gene ID:

ENSAPLG00000009980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036596

3289215 - 3323561

34347

ENSAPLT00000010454

3286021 - 3323071

37051