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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3315021_3317391_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3315021 - 3317391

Intron Length:

2371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

TGTCTTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

TACTCCCCAACT

Flanking Amino Acid:

RLLQSFSDHHENKYLLLNSQ

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

71.6

40.2

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

75.8

0.58

0.9

73.8

36.9

Minor 5ss

35.2

-1.7

2.8

40.2

Minor BPS

0.36

1.9

78.63

Associated Gene:

Gene:

TRPC4AP

Ensembl Gene ID:

ENSAPLG00000009980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036596

3289215 - 3323561

34347

ENSAPLT00000010454

3286021 - 3323071

37051