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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3317494_3318586_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3317494 - 3318586

Intron Length:

1093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CATGTGCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

ATTTCTTCATGT

Flanking Amino Acid:

PEVDAVVNTDRSLVCDGKRG

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.8

38.7

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

70.2

0.45

0.9

66.1

40.5

Minor 5ss

29.7

-2.3

2.6

33.4

41.8

Minor BPS

49.6

0.05

2.1

74.31

42.8

Associated Gene:

Gene:

TRPC4AP

Ensembl Gene ID:

ENSAPLG00000009980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036596

3289215 - 3323561

34347

ENSAPLT00000010454

3286021 - 3323071

37051