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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3318671_3319008_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3318671 - 3319008

Intron Length:

338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCGTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TGCTCCAGAGTT

Flanking Amino Acid:

MKKEPAESSFRFWQARAVES

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.4

19.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

77.3

0.62

0.8

76.3

32.2

Minor 5ss

34.1

-1.8

2.8

39.9

46.1

Minor BPS

46.9

-0.1

1.9

66.84

43.7

Associated Gene:

Gene:

TRPC4AP

Ensembl Gene ID:

ENSAPLG00000009980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036596

3289215 - 3323561

34347

ENSAPLT00000010454

3286021 - 3323071

37051