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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3319100_3319437_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3319100 - 3319437

Intron Length:

338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGAAT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCATGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

CCTCCCATGACA

Flanking Amino Acid:

MFLLKRGLLEHILYCIVDSE

Intron Amino Acid Position:

521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

80.6

33.5

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

66.3

0.37

33.8

Minor 5ss

-1.8

3.2

48.4

47.4

Minor BPS

55.9

0.18

1.7

65.01

41.3

Associated Gene:

Gene:

TRPC4AP

Ensembl Gene ID:

ENSAPLG00000009980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036596

3289215 - 3323561

34347

ENSAPLT00000010454

3286021 - 3323071

37051