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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3319579_3321221_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3319579 - 3321221

Intron Length:

1643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTCTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATG

Flanking Amino Acid:

FNKYINTDEKFQIFLNQINS

Intron Amino Acid Position:

568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

93.3

21.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.2

0.77

0.7

77.7

31.2

Minor 5ss

-1

59.7

44.8

Minor BPS

73.5

0.6

1.2

72.81

34.2

Associated Gene:

Gene:

TRPC4AP

Ensembl Gene ID:

ENSAPLG00000009980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036596

3289215 - 3323561

34347

ENSAPLT00000010454

3286021 - 3323071

37051