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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3321331_3321675_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3321331 - 3321675

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTGCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATGAT

U12 Branch Point Sequence:

TGTTAAGTACCT

Flanking Amino Acid:

DRFENQSDAKVAEVLSECRL

Intron Amino Acid Position:

604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

81.1

32.6

Major BPS

69.5

0.48

1.2

59.7

46.7

Major PPT

81.6

0.71

0.8

75.9

32.8

Minor 5ss

33.3

-1.9

3.3

47.8

47.9

Minor BPS

43.5

-0.4

2.5

70.99

45.3

Associated Gene:

Gene:

TRPC4AP

Ensembl Gene ID:

ENSAPLG00000009980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010454

3286021 - 3323071

37051

ENSAPLT00000036596

3289215 - 3323561

34347