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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3327123_3327344_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3327123 - 3327344

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

CTGCCTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGTGAG

U12 Branch Point Sequence:

AGCTCGTGAGCT

Flanking Amino Acid:

KKQIQKLEARVRELEGELDM

Intron Amino Acid Position:

1827

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

64.3

47.1

Major BPS

47.9

-0.1

1.7

47.8

Major PPT

71.3

0.48

0.8

64.7

30.9

Minor 5ss

31.2

-2.1

3.1

31.4

42.5

Minor BPS

44.9

-0.3

2.3

64.16

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454